Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914483.1_cds_XP_016464466.1_57502
CDS Infomation

[gene=LOC107787414] [db_xref=GeneID:107787414] [protein=4-coumarate--CoA ligase-like 9] [protein_id=XP_016464466.1] [location=complement(join(72152..72277,72500..72602,73449..73516,73629..73774,74508..74697,75212..76228))] [gbkey=CDS]
Sequence

ATGGATCCAAGGAATGGCTATTGCCCACAAACTAAAACTTTCCTTAGCCTAAGACAACCA
GTTCCATTGCCACCGTTAACAGAACCTCTTTCTATCATCCAATACACCCTCTCTCTCCTC
AACTCACCGATCACCGGAATCAATGTCAATGCCACCACTTTCCTTATTGACGCCACCACC
GGCCACCGCCTCTCTTACGCCGATTTCCTTCAAAAAACTCAATCTCTTGCTTCTTCTCTC
CAAGCCCGTTTCCCTTCCCTTTCTAAAAACGGTGTCGCCTTTGTTCTCTCCCCTCCTTCA
CCCCATATTCCAATTGTATATTTCGTACTCCTCTCTCTAGGGATCGTTGTTTCTCCTGCT
AATCCACTTTCTTCCACTTCCGAGGTAGCTCACATGATTCAGCTGTGTAAACCCGCCATT
GCTTTTGCAACTTCCTCTACTGCCGTTAAACTGCCGTCGCTTCCCCTTGGTACTATTCTA
CTTGATTCCCCTGAATTTCTCTCTATGATTCAAGCTCCCGTTTCTACTCAAATCTCTTAT
CCAGTTATTCACCAGTCCGATTCGGCAGCGATTCTTTACTCGTCTGGAACTACTGGGAAA
GTAAAAGGTGTTGAGTTAACTCACCGGAATTTAATCGCGTTAACAGCCGGTTTGTACTAC
AACAAATTCAATGATGCTGCTGATGAAGGTGAAAAGGCGGAGCAAGAGGTGTCGTTCATG
ACGTTGCCGATGTTTCACGTGTTTGGATTTTTTATGCTTATTAGATTAGCGGCGTTCGGG
GAGACGGTGGTGATGATTGAGAAATTTGATTTTGAGAAGATGTTGAAGGCGGTGGAGAAG
TACAGAGTTACGTACATCCCAGTGTCGCCGCCACTGGTGGTGGCAATGGCGAAGTCTGAT
TTGGCGTTGAAGTATGATCTCAGCTCACTGAAGCTGCTGGCGTGCGGCGGAGCGCCGCTG
GGGAAGGAGGTGGCAGAGCGGTTCAAGAGCAGGTTCCCTAACGTGATGATAATACAAGGA
TATGGTCTGACCGAGACTACTGGAGGAGCAACAGGGATGAGTGGCCCTGAGGAATCAGAC
CGGTATGGATCTGCTGGTCGCCTTGCTGTGAATGTGGAAGCTAAGATTGTTGATCCTGAT
AGTGGAGAGACCTTACCTCCTGGCCAGCGTGGAGAGCTTTGGATACGCGGGCCAACAATC
ATGAAAGGCTATGTTGGAGATGAACAAGCAACCTCAGCAACACTCGATTCAGAAGGTTGG
CTGAAAACTGGCGATCTCTGCTATTTTGATGCAGATGGGTTTCTATATGTTGTCGATAGG
TTAAAAGAACTGATAAAGTACAAGGCGTATCAGGTCCCCCCTGCTGAACTTGAACATTTG
CTTCAATCAATTCCTGATGTTGCTGATGCAGCAGTTATTCCATATCCTGATGAAGAAGCA
GGGCAGATTCCTATGGCTTATGTAGTCAGAAGACCAGGAAGCACTATTAGTGAGTCACAA
ATTATAGATGTCATTGCAAAACAGGTCGCACCATACAAAAAGATACGGCGTGTTGCATTC
ATCAACGCAATACCAAAATCTCCAGCAGGAAAGATCTTGAGGAGAGAACTCGTTAATCAT
GCCTCTAGTGGTGCTTCTGCAAGATTGTGA

Peptide Sequence

PEP ID

XP_016464466.1
PEP Infomation

PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tabacum]
Sequence

MDPRNGYCPQTKTFLSLRQPVPLPPLTEPLSIIQYTLSLLNSPITGINVNATTFLIDATT
GHRLSYADFLQKTQSLASSLQARFPSLSKNGVAFVLSPPSPHIPIVYFVLLSLGIVVSPA
NPLSSTSEVAHMIQLCKPAIAFATSSTAVKLPSLPLGTILLDSPEFLSMIQAPVSTQISY
PVIHQSDSAAILYSSGTTGKVKGVELTHRNLIALTAGLYYNKFNDAADEGEKAEQEVSFM
TLPMFHVFGFFMLIRLAAFGETVVMIEKFDFEKMLKAVEKYRVTYIPVSPPLVVAMAKSD
LALKYDLSSLKLLACGGAPLGKEVAERFKSRFPNVMIIQGYGLTETTGGATGMSGPEESD
RYGSAGRLAVNVEAKIVDPDSGETLPPGQRGELWIRGPTIMKGYVGDEQATSATLDSEGW
LKTGDLCYFDADGFLYVVDRLKELIKYKAYQVPPAELEHLLQSIPDVADAAVIPYPDEEA
GQIPMAYVVRRPGSTISESQIIDVIAKQVAPYKKIRRVAFINAIPKSPAGKILRRELVNH
ASSGASARL

Transcript Sequence

Gene sequence data has not been registered.